| 1+25 | 36 | Mika Kallio | KTM · Red Bull KTM GP125 | 30:10.854 | 1'59.660 | 208.1 |
| 2+20 | 12 | Thomas Lüthi | Honda · Elit Grand Prix | +0.111 | 1'59.613 | 209.5 |
| 3+16 | 55 | Hector Faubel | Aprilia · Master Aspar | +1.517 | 1'59.510 | 214.9 |
| 4+13 | 71 | Tomoyoshi Koyama | Honda · Ajo Motorsport | +2.349 | 1'59.785 | 217.0 |
| 5+11 | 75 | Mattia Pasini | Aprilia · Totti Top Sport - NGS | +2.406 | 1'59.864 | 210.2 |
| 6+10 | 54 | Manuel Poggiali | Gilera · Metis Racing Team | +2.619 | 1'59.779 | 216.5 |
| 7+9 | 33 | Sergio Gadea | Aprilia · Master Aspar | +2.761 | 1'59.678 | 215.4 |
| 8+8 | 22 | Pablo Nieto | Derbi · Caja Madrid - Derbi Racing | +2.961 | 1'59.951 | 214.5 |
| 9+7 | 19 | Alvaro Bautista | Honda · Seedorf RC3 - Tiempo Holidays | +3.720 | 1'59.764 | 220.1 |
| 10+6 | 32 | Fabrizio Lai | Honda · Kopron Racing World | +9.936 | 2'00.112 | 210.4 |
| 11+5 | 63 | Mike Di Meglio | Honda · Kopron Racing World | +14.546 | 2'00.252 | 207.9 |
| 12+4 | 41 | Aleix Espargaro | Honda · Seedorf RC3 - Tiempo Holidays | +14.693 | 2'00.449 | 206.1 |
| 13+3 | 29 | Andrea Iannone | Aprilia · Abruzzo Racing Team | +15.699 | 2'00.479 | 207.9 |
| 14+2 | 9 | Toshihisa Kuzuhara | Honda · Angaia Racing | +20.833 | 2'00.792 | 217.2 |
| 15+1 | 51 | Enrique Jerez | Derbi · Caja Madrid - Derbi Racing | +22.562 | 2'00.835 | 210.7 |
| 16 | 35 | Raffaele De Rosa | Aprilia · Matteoni Racing | +24.038 | 2'01.020 | 208.1 |
| 17 | 8 | Lorenzo Zanetti | Aprilia · Skilled I.S.P.A. Racing Team | +25.907 | 2'01.117 | 208.8 |
| 18 | 6 | Joan Olive | Aprilia · Nocable.it Race | +27.014 | 2'00.510 | 210.6 |
| 19 | 43 | Manuel Hernandez | Aprilia · Totti Top Sport - NGS | +27.502 | 2'00.928 | 208.9 |
| 20 | 7 | Alexis Masbou | Honda · Ajo Motorsport | +27.548 | 2'00.768 | 207.1 |
| 21 | 45 | Imre Toth | Aprilia · Road Racing Team Hungary | +47.987 | 2'02.226 | 208.6 |
| 22 | 68 | Hiroaki Kuzuhara | Honda · Jha Racing | +48.337 | 2'02.608 | 202.9 |
| 23 | 10 | Federico Sandi | Honda · Angaia Racing | +48.524 | 2'02.554 | 205.2 |
| 24 | 64 | Yuki Hamamoto | Honda · Hamamoto Racing Team | +51.086 | 2'02.671 | 205.5 |
| 25 | 20 | Takumi Takahashi | Honda · Arie Molenaar Racing | +53.530 | 2'02.390 | 206.3 |
| 26 | 66 | Arata Mori | Honda · Team Harc-Pro | +53.610 | 2'02.548 | 211.7 |
| 27 | 26 | Vincent Braillard | Aprilia · Road Racing Team Hungary | +54.652 | 2'03.085 | 205.9 |
| 28 | 44 | Karel Abraham | Aprilia · Semprucci Cardion Blauer | +55.454 | 2'02.900 | 202.9 |
| 29 | 67 | Kazuki Hanafusa | Honda · Team Harc-Pro | +1:03.564 | 2'03.381 | 199.9 |
| 30 | 28 | Jordi Carchano | Aprilia · MVA Aspar | +2 lap | 2'02.787 | 210.9 |
| — | 11 | Sandro Cortese | Honda · Kiefer-Bos-Castrol Honda | DNF | 2'01.021 | 204.9 |
| — | 14 | Gabor Talmacsi | KTM · Red Bull KTM GP125 | DNF | 1'59.555 | 207.9 |
| — | 15 | Michele Pirro | Malaguti · Malaguti Reparto Corse | DNF | 2'02.897 | 203.5 |
| — | 25 | Dario Giuseppetti | Aprilia · Semprucci Cardion Blauer | DNF | 2'02.381 | 206.7 |
| — | 31 | Sascha Hommel | Malaguti · Malaguti Reparto Corse | DNF | 2'03.679 | 205.9 |
| — | 46 | Mateo Tunez | Aprilia · MVA Aspar | DNF | 1'59.018 | 230.1 |
| — | 48 | David Bonache | Honda · LG Mobile Galicia Team | Out on lap 1 | | |
| — | 52 | Lukas Pesek | Derbi · Metis Racing Team | DNF | 2'00.942 | 210.4 |
| — | 58 | Marco Simoncelli | Aprilia · Nocable.it Race | DNF | 1'59.581 | 211.4 |
| — | 60 | Julian Simon | KTM · Red Bull KTM GP125 | Out on lap 1 | | |
| — | 65 | Hiroomi Iwata | Honda · Club Plus One | DNF | 2'02.703 | 206.6 |