| 1+25 | 19 | Alvaro Bautista | Aprilia · Master - MVA Aspar Team | 41:42.761 | 1'47.576 | 211.1 |
| 2+20 | 52 | Lukas Pesek | Derbi · Derbi Racing | +3.072 | 1'47.404 | 213.1 |
| 3+16 | 75 | Mattia Pasini | Aprilia · Master - MVA Aspar Team | +6.491 | 1'47.960 | 214.6 |
| 4+13 | 36 | Mika Kallio | KTM · Red Bull KTM GP 125 | +6.693 | 1'48.279 | 212.6 |
| 5+11 | 60 | Julian Simon | KTM · Red Bull KTM GP 125 | +6.877 | 1'47.697 | 212.3 |
| 6+10 | 55 | Hector Faubel | Aprilia · Master - MVA Aspar Team | +7.137 | 1'48.023 | 214.7 |
| 7+9 | 33 | Sergio Gadea | Aprilia · Master - MVA Aspar Team | +7.291 | 1'48.123 | 214.5 |
| 8+8 | 14 | Gabor Talmacsi | Honda · Humangest Racing Team | +19.931 | 1'48.170 | 207.5 |
| 9+7 | 6 | Joan Olive | Aprilia · SSM Racing | +22.886 | 1'48.667 | 211.2 |
| 10+6 | 22 | Pablo Nieto | Aprilia · Multimedia Racing | +27.176 | 1'48.584 | 211.7 |
| 11+5 | 24 | Simone Corsi | Gilera · Squadra Corse Metis Gilera | +28.951 | 1'49.113 | 211.6 |
| 12+4 | 71 | Tomoyoshi Koyama | Malaguti · Malaguti Ajo Corse | +37.653 | 1'49.127 | 211.2 |
| 13+3 | 8 | Lorenzo Zanetti | Aprilia · Skilled I.S.P.A. Racing Team | +42.814 | 1'49.425 | 211.5 |
| 14+2 | 12 | Federico Sandi | Aprilia · SSM Racing | +42.909 | 1'49.116 | 213.7 |
| 15+1 | 29 | Andrea Iannone | Aprilia · TicinoHosting Campetella JNR Team | +42.998 | 1'49.561 | 209.9 |
| 16 | 11 | Sandro Cortese | Honda · Elit - Caffe Latte | +46.381 | 1'48.837 | 210.9 |
| 17 | 38 | Bradley Smith | Honda · Repsol Honda | +50.685 | 1'49.658 | 210.4 |
| 18 | 43 | Manuel Hernandez | Honda · Nocable Angaia Racing | +51.169 | 1'49.833 | 207.1 |
| 19 | 18 | Nicolas Terol | Derbi · Derbi Racing | +51.260 | 1'49.847 | 210.7 |
| 20 | 9 | Michael Ranseder | KTM · Red Bull KTM Junior Team | +51.803 | 1'49.506 | 210.1 |
| 21 | 63 | Mike Di Meglio | Honda · FFM Honda Grand Prix 125 | +52.726 | 1'49.306 | 210.6 |
| 22 | 23 | Lorenzo Baroni | Honda · Humangest Racing Team | +55.698 | 1'49.488 | 208.3 |
| 23 | 44 | Karel Abraham | Aprilia · Cardion AB Motoracing | +1:01.202 | 1'50.013 | 207.7 |
| 24 | 79 | Enrique Jerez | Aprilia · WTR Blauer USA | +1:03.282 | 1'50.141 | 207.9 |
| 25 | 26 | Vincent Braillard | Aprilia · Multimedia Racing | +1:12.858 | 1'50.512 | 211.4 |
| 26 | 45 | Imre Toth | Aprilia · Team Toth | +1:17.040 | 1'50.252 | 206.5 |
| 27 | 78 | Hugo Van Den Berg | Aprilia · Varenhof Racing Team | +1:24.686 | 1'50.824 | 209.3 |
| 28 | 21 | Mateo Tunez | Aprilia · Master - MVA Aspar Team | +1:28.944 | 1'50.952 | 208.1 |
| 29 | 16 | Michele Conti | Honda · Valsir Seedorf Racing | +1:31.226 | 1'51.130 | 208.1 |
| 30 | 80 | Tito Rabat | Honda · Honda BQR | +1:35.989 | 1'51.262 | 206.7 |
| 31 | 53 | Simone Grotzkyj | Aprilia · TicinoHosting Campetella JNR Team | +1:44.938 | 1'51.884 | 208.8 |
| 32 | 77 | Daniel Saez | Aprilia · Quinto Almoradi | +1:49.656 | 1'51.206 | 207.2 |
| 33 | 37 | Joey Litjens | Honda · Arie Molenaar Racing | +1 lap | 1'53.130 | 206.3 |
| 34 | 20 | Roberto Tamburini | Aprilia · Matteoni Racing | +1 lap | 1'53.705 | 207.3 |
| — | 1 | Thomas Lüthi | Honda · Elit - Caffe Latte | DNF | 1'49.068 | 211.9 |
| — | 10 | Angel Rodriguez | Aprilia · 3C Racing | DNF | 1'49.068 | 210.7 |
| — | 32 | Fabrizio Lai | Honda · Valsir Seedorf Racing | DNF | 1'49.160 | 212.0 |
| — | 35 | Raffaele De Rosa | Aprilia · Multimedia Racing | DNF | 1'49.208 | 212.6 |
| — | 41 | Aleix Espargaro | Honda · Wurth Honda BQR | DNF | 1'49.094 | 209.4 |
| — | 76 | Ivan Maestro | Honda · Lambea TMM Racing | DNF | 1'52.763 | 203.6 |